Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015887446.1_cds_XP_016441822.1_37146
CDS Infomation	[gene=LOC107767359] [db_xref=GeneID:107767359] [protein=phytochrome B] [protein_id=XP_016441822.1] [location=join(17260..19333,20773..21580,23274..23567,24509..24728)] [gbkey=CDS]
Sequence	ATGGCTTCTGGAAGTAGAACAAAGCATTCTCATCAGTCAGGTCAAGTTCAAGCTCAATCT TCAGGCACAAGTAATGTTAATTACAAAGATTCAATAAGCAAAGCCATAGCACAGTACACA GCTGATGCTAGGCTTCATGCTGTGTTTGAACAATCTGGTGAGTCTGGCAAGTCTTTTGAT TATTCACAGTCTGTTAAAACTACTACACAATCTGTTGTCCCTGAACAGCAAATTACTGCT TATTTGACTAAAATCCAAAGAGGGGGTCACATTCAGCCTTTTGGTTGTATGATAGCTGTA GATGAGGCTAGTTTTCGTGTTATTGCTTATAGCGAAAATGCGTGCGAAATGCTTAGTCTA ACTCCACAATCAGTTCCAAGCCTTGAGCGGCCTGAGATCCTCACTGTTGGAACTGATGTT AGGACCCTTTTTACTCCTTCTAGCTCTGTTTTGCTTGAAAGAGCATTTGGGGCGCGCGAG ATCACTTTGCTGAATCCTATTTGGATACATTCCAAGAATTCTGGCAAGCCATTTTACGCA ATTTTGCATAGGGTTGATGTCGGGATTGTAATTGATTTGGAGCCTGCTAGAACAGAGGAC CCTGCTTTATCCATTGCTGGCGCAGTGCAGTCGCAAAAACTTGCAGTGAGGGCTATTTCT CATTTGCAATCACTTCCTGGTGGGGATGTTAAGCTTTTGTGTGATACTGTGGTTGAGAGT GTGAGGGAGTTAACCGGGTATGATCGGGTTATGGTATATAAATTTCATGAGGATGAGCAT GGGGAGGTAGTGGCTGAGAGCAAAAGACCGGATTTAGAGCCCTATATTGGTTTGCATTAT CCTGCTACCGACATTCCTCAAGCTTCACGGTTTTTGTTTAAGCAGAACAGGGTAAGAATG ATTGTGGACTGCCATGCCAGCCCTGTGCGGGTTGTTCAGGATGAATCACTGATGCAGCCT TTATGTTTAGTTGGTTCCACACTTAGAGCCCCTCATGGTTGCCACGCGCAGTACATGGCA AATATGGGGTCTATTGCGTCATTAACTCTAGCAGTTATTATCAATGGAAACGATGAGGAA GCTGTTGGGGGCCGAAGTTCAATGAGGCTATGGGGCTTGGTTGTTGGACACCATACTTCT GCTAGGTGCATTCCATTCCCTCTTCGGTATGCCTGTGAATTCCTTATGCAGGCCTTTGGA CTCCAATTGAATATGGAGTTGCAACTGGCATCACAGTTGTCTGAGAAACATGTGTTGAGG ACACAAACACTGTTATGTGACATGCTCCTTCGAGACTCACCTACGGGGATTGTTACCCAG AGCCCCAGTATTATGGACCTTGTGAAGTGCGATGGCGCTGCTCTGTACTGTCAGGGGAAG TACTATCCATTAGGCGTTACACCAACTGAAGCTCAGATAAAGGACATTGTGGAGTGGTTA TTGACTTACCATGGGGACTCAACAGGTTTAAGTACTGACAGTTTGGCTGATGCAGGGTAT CCTGGGGCAGCTTCGCTTGGTGATGCAGTTTGTGGTATGGCTGTTGCTTATATAACTTCT AAAGATTTCTTGTTTTGGTTTCGCTCCCATACAGCGAAAGAGATAAAGTGGGGTGGTGCA AAGCATCATCCTGAAGACAAGGATGACGGGCAGAGAATGCATCCACGTTCTTCTTTCAAG GCATTTCTGGAAGTTGTTAAAAGCCGGAGCTTACCATGGGAAAATGCAGAAATGGATGCA ATTCACTCTCTGCAGCTTATTCTGCGAGATTCATTTAAGGATGCCGAGGCAAGTAATTCT AAGGCTGTTGTGCATGCTCAGCTTGGGGAAATGGAGTTGCAAGGGATAGATGAACTGAGT TCTGTTGCCAGAGAAATGGTTAGATTGATAGAGACTGCAACTGCTCCCATATTTGCTGTT GATGTCGAAGGTCGCATTAATGGGTGGAATGCAAAGGTCGCTGAATTGACAGATTTATCT GTTGAAGAAGCAATGGGGAAGTCCTTGGTTCATGATCTTGTGCATAAAGAGTCACAGGAG ACTGCTGAGAAGCTTCTCTTCAATGCTCTGAGAGGCGAAGAAGATAAAAATGTAGAAATA AAGTTAAGGACATTTGGACCCGAGCAACTGAAGAAGGCTGTTTTTGTGGTGGTTAATGCT TGCTCTAGCAAAGATTACACAAACAACATTGTTGGTGTTTGTTTTGTTGGCCAGGATGTT ACTGGGCAAAAAGTTGTAATGGACAAGTTTATTCACATCCAAGGTGATTACAAGGCCATT GTGCACAGCCCCAATCCTCTGATCCCACCCATATTTGCGTCAGATGAGAACACTTGTTGC TCTGAGTGGAACACTGCCATGGAAAAGCTCACTGGTTGGTCCAGAGGGGAGATCATTGGA AAAATGTTAGTTGGTGAGATTTTTGGAAGTTGCTGTCGGCTCAAGGGTCCAGACGCCATG ACAAAGTTCATGATCGTGTTGCATAATGCGATTGGAGTCCAGGATACGGACAAGTTTCCA TTTTCCTTTTTTGACCGAAATGGGAAATATGTGCAAGCTCTTTTGACTGCGAACAAGAGA GTCAATATGGAGGGCCAGATTATCGGGGCTTTCTGTTTCATACAGATAGCCAGTCCTGAA TTGCAGCAAGCTCTAAGAGTTCAAAGGCAACAGGAAAAGAAGTGTTATTCTCAGATGAAA GAGTTGGCATACCTTTGTCAGGAAATAAAGAGTCCTTTGAATGGTATACGCTTTACAAAT TCATTGTTGGAAGCGACAGATTTGACAGAAAACCAGAAGCAGTATCTGGAGACAAGTGCT GCTTGTGAGAGGCAGATGTCTAAGATCATAAGGGATGTTGACCTGGAAAACATTGAGGAT GGCTCACTGACCCTTGAGAAAGAAGAATTTTTCCTTGGGAGTGTAATAGATGCTGTTGTT AGCCAAGTGATGTTATTGCTGAGGGAAAGAAGTGTGCAATTAATCAGGGATATTCCAGAG GAAATTAAGACCTTAACAGTACATGGTGATCAAGTGAGAATTCAACAGGTCTTGGCAGAT TTCTTGCTTAACATGGTACGGTATGCACCATCACCTGATGGTTGGGTAGAGATCCAACTT CAGCCAAATATGAAGCAAATATCTGATGAAGTAACTGTTGTGCATATTGAATTCAGGATT GTATGCCCTGGTGAAGGGCTTCCTCCTGAATTGGTTCAAGACATGTTCCACAGCAGTCGG TGGGTAACCAAGGAAGGCCTAGGACTGAGCATGTGCAGAAAAATCTTAAAGCTTATGAAT GGAGATATCCAGTATATCAGAGAATCAGAAAGATGTTATTTCCTGATCATCCTTGACCTA CCAATGACCCGCAGAGGTTCAAAGAGTCTTGGCTAG

Peptide Sequence

PEP ID	XP_016441822.1
PEP Infomation	PREDICTED: phytochrome B [Nicotiana tabacum]
Sequence	MASGSRTKHSHQSGQVQAQSSGTSNVNYKDSISKAIAQYTADARLHAVFEQSGESGKSFD YSQSVKTTTQSVVPEQQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEMLSL TPQSVPSLERPEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYA ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKLLCDTVVES VRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRM IVDCHASPVRVVQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEE AVGGRSSMRLWGLVVGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLR TQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQIKDIVEWL LTYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGA KHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEASNS KAVVHAQLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTDLS VEEAMGKSLVHDLVHKESQETAEKLLFNALRGEEDKNVEIKLRTFGPEQLKKAVFVVVNA CSSKDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCC SEWNTAMEKLTGWSRGEIIGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGVQDTDKFP FSFFDRNGKYVQALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQQEKKCYSQMK ELAYLCQEIKSPLNGIRFTNSLLEATDLTENQKQYLETSAACERQMSKIIRDVDLENIED GSLTLEKEEFFLGSVIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVHGDQVRIQQVLAD FLLNMVRYAPSPDGWVEIQLQPNMKQISDEVTVVHIEFRIVCPGEGLPPELVQDMFHSSR WVTKEGLGLSMCRKILKLMNGDIQYIRESERCYFLIILDLPMTRRGSKSLG

Transcript Sequence

Gene sequence data has not been registered.